Fixes#22236
---
Error occurring currently while trying to revert commit using read-tree
-m approach:
> 2022/12/26 16:04:43 ...rvices/pull/patch.go:240:AttemptThreeWayMerge()
[E] [63a9c61a] Unable to run read-tree -m! Error: exit status 128 -
fatal: this operation must be run in a work tree
> - fatal: this operation must be run in a work tree
We need to clone a non-bare repository for `git read-tree -m` to work.
bb371aee6e
adds support to create a non-bare cloned temporary upload repository.
After cloning a non-bare temporary upload repository, we [set default
index](https://github.com/go-gitea/gitea/blob/main/services/repository/files/cherry_pick.go#L37)
(`git read-tree HEAD`).
This operation ends up resetting the git index file (see investigation
details below), due to which, we need to call `git update-index
--refresh` afterward.
Here's the diff of the index file before and after we execute
SetDefaultIndex: https://www.diffchecker.com/hyOP3eJy/
Notice the **ctime**, **mtime** are set to 0 after SetDefaultIndex.
You can reproduce the same behavior using these steps:
```bash
$ git clone https://try.gitea.io/me-heer/test.git -s -b main
$ cd test
$ git read-tree HEAD
$ git read-tree -m 1f085d7ed8 1f085d7ed8 9933caed00
error: Entry '1' not uptodate. Cannot merge.
```
After which, we can fix like this:
```
$ git update-index --refresh
$ git read-tree -m 1f085d7ed8 1f085d7ed8 9933caed00
```
Currently 'userxx' and 'orgxx' are both used as username in test files
when the user type is org, which is confusing. This PR replaces all
'userxx' with 'orgxx' when the user type is org(`user.type==1`).
Some non-trivial changes
1. Rename `user3` dir to `org3` in `tests/git-repositories-meta`
2. Change `end` in `issue reference` because 'org3' is one char shorter
than 'user3'

3. Change the search result number of `user/repo2` because
`user3/repo21` can't be searched now

4. Change the first org name getting from API because the result is
ordered by alphabet asc and now `org 17` is before `org25`


Other modifications are just find all and replace all.
Unit tests with SQLite are all passed.
---------
Co-authored-by: caicandong <1290147055@qq.com>
This PR adds a new dropdown to select a commit or a commit range
(shift-click like github) of a Pull Request.
After selection of a commit only the changes of this commit will be shown.
When selecting a range of commits the diff of this range is shown.
This allows to review a PR commit by commit or by viewing only commit ranges.
The "Show changes since your last review" mechanism github uses is implemented, too.
When reviewing a single commit or a commit range the "Viewed" functionality is disabled.
## Screenshots
### The commit dropdown

### Selecting a commit range

### Show changes of a single commit only

### Show changes of a commit range

Fixes https://github.com/go-gitea/gitea/issues/20989
Fixes https://github.com/go-gitea/gitea/issues/19263
---------
Co-authored-by: silverwind <me@silverwind.io>
Co-authored-by: KN4CK3R <admin@oldschoolhack.me>
Co-authored-by: wxiaoguang <wxiaoguang@gmail.com>
Co-authored-by: delvh <dev.lh@web.de>
Fix#25558
Extract from #22743
This PR added a repository's check when creating/deleting branches via
API. Mirror repository and archive repository cannot do that.
### Summary
Extend the template variable substitution to replace file paths. This
can be helpful for setting up log files & directories that should match
the repository name.
### PR Changes
- Move files matching glob pattern when setting up repos from template
- For security, added ~escaping~ sanitization for cross-platform support
and to prevent directory traversal (thanks @silverwind for the
reference)
- Added unit testing for escaping function
- Fixed the integration tests for repo template generation by passing
the repo_template_id
- Updated the integration testfiles to add some variable substitution &
assert the outputs
I had to fix the existing repo template integration test and extend it
to add a check for variable substitutions.
Example:

`namedBlob` turned out to be a poor imitation of a `TreeEntry`. Using
the latter directly shortens this code.
This partially undoes https://github.com/go-gitea/gitea/pull/23152/,
which I found a merge conflict with, and also expands the test it added
to cover the subtle README-in-a-subfolder case.
Add test coverage to the important features of
[`routers.web.repo.renderReadmeFile`](067b0c2664/routers/web/repo/view.go (L273));
namely that:
- it can handle looking in docs/, .gitea/, and .github/
- it can handle choosing between multiple competing READMEs
- it prefers the localized README to the markdown README to the
plaintext README
- it can handle broken symlinks when processing all the options
- it uses the name of the symlink, not the name of the target of the
symlink
`renderReadmeFile` needs `readmeTreelink` as parameter but gets
`treeLink`.
The values of them look like as following:
`treeLink`: `/{OwnerName}/{RepoName}/src/branch/{BranchName}`
`readmeTreelink`:
`/{OwnerName}/{RepoName}/src/branch/{BranchName}/{ReadmeFileName}`
`path.Dir` in
8540fc45b1/routers/web/repo/view.go (L316)
should convert `readmeTreelink` into
`/{OwnerName}/{RepoName}/src/branch/{BranchName}` instead of the current
`/{OwnerName}/{RepoName}/src/branch`.
Fixes#23151
---------
Co-authored-by: Jason Song <i@wolfogre.com>
Co-authored-by: John Olheiser <john.olheiser@gmail.com>
Co-authored-by: silverwind <me@silverwind.io>